Table 5 Performance results for contact map prediction. Contact threshold: 8 Ã…. Accuracy and coverage (as %) for 8 Ã… contact map predictor for distance separations greater than 5, 11 and 23 amino acids, when the top N/5 and top N/2 contacts are considered (where N is the length of the protein).
From: A two-stage approach for improved prediction of residue contact maps
|  | |i - j| ≥ 6 | |i - j| ≥ 12 | |i - j| ≥ 24 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Â | N/5 | N/2 | N/5 | N/2 | N/5 | N/2 | ||||||
| Â | P | R | P | R | P | R | P | R | P | R | P | R |
MA | 30.8 | 3.9 | 26.2 | 8.5 | 23.9 | 3.8 | 19.2 | 7.8 | 14.1 | 3.3 | 11.1 | 6.6 |
MA_PE | 43.0 | 5.5 | 34.6 | 11.2 | 34.2 | 5.5 | 26.6 | 10.8 | 19.6 | 4.6 | 15.0 | 8.9 |
MA_SS_ACC | 44.4 | 5.7 | 36.0 | 11.6 | 34.2 | 5.5 | 26.6 | 10.8 | 17.8 | 4.2 | 14.7 | 8.7 |
MA_SS_ACC_PE | 46.4 | 5.9 | 36.6 | 11.8 | 35.4 | 5.7 | 27.0 | 11.0 | 19.8 | 4.6 | 15.7 | 9.3 |