Table 5 Prediction accuracies of VSL2 predictors. The accuracies and standard errors were estimated via a 10-fold cross-validation procedure described (see Performance evaluation). The default decision threshold 0.5 was used for all four predictors. SN is the overall sensitivity, or true positive rate, on all disordered regions, and ACC is the overall accuracy calculated as (SN + SP)/ 2.
From: Length-dependent prediction of protein intrinsic disorder
| Â | SN | SP | ACC | SN S | SN L |
|---|---|---|---|---|---|
VSL2-S | 79.8 ± 1.0 | 81.5 ± 0.3 | 80.7 ± 0.5 | 82.0 ± 1.1 | 70.7 ± 1.9 |
VSL2-L | 54.2 ± 1.6 | 87.3 ± 0.5 | 70.7 ± 0.8 | 44.1 ± 1.8 | 82.1 ± 2.2 |
VSL2-M1 | 82.3 ± 1.1 | 81.0 ± 0.5 | 81.6 ± 0.5 | 81.3 ± 1.2 | 82.3 ± 1.8 |
VSL2-M2 | 82.1 ± 1.0 | 80.7 ± 0.5 | 81.4 ± 0.5 | 81.1 ± 1.2 | 81.8 ± 1.8 |
(a) per-chain | |||||
| Â | SN | SP | ACC | SN S | SN L |
VSL2-S | 75.2 ± 2.5 | 81.3 ± 0.3 | 78.3 ± 1.3 | 78.1 ± 1.3 | 74.1 ± 3.5 |
VSL2-L | 74.7 ± 2.9 | 89.0 ± 0.5 | 81.9 ± 1.6 | 47.3 ± 2.0 | 84.4 ± 3.1 |
VSL2-M1 | 82.9 ± 2.1 | 81.6 ± 0.4 | 82.3 ± 1.1 | 77.6 ± 1.4 | 84.7 ± 2.7 |
VSL2-M2 | 82.8 ± 2.1 | 81.6 ± 0.5 | 82.2 ± 1.1 | 78.3 ± 1.3 | 84.3 ± 2.6 |
(b) per-residue | |||||