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Table 1 Performance of ExpressHMM and ANTM on the training set of probes covering RefSeq genes. The statistics show to what extent the two approaches make predictions in accordance with the RefSeq annotation. The exon/transfrag statistics refer to the sets of contiguous probes representing exons/transfrags. The splice site sensitivities refer to the single probes constituting the borders of such sets.

From: A hidden Markov model approach for determining expression from genomic tiling micro arrays

  ExpressHMM ANTM
Probe sensitivity 65% 44%
Novel probes predicted 65% 49%
Overlap exon Sensitivity 58% 58%
Novel transfrags predicted 27% 58%
5' Splice site sensitivity 16% 9%
3' Splice site sensitivity 16% 13%