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Table 2 Performance of ExpressHMM and ANTM on the tiled regions of the ten chromosomes. The statistics show to what extent the two approaches make predictions in accordance with the collection of Human EST, mRNA, and known gene annotation.

From: A hidden Markov model approach for determining expression from genomic tiling micro arrays

  ExpressHMM ANTM
Nucleotide sensitivity 35% 20%
Novel nucleotides 55% 46%
Nucleotide Count 43523440 21190998
Transfrag sensitivity 27% 22%
Novel transfrags 44% 58%
Transfrag Count 88604 170788
Average Length 491.21 124.08
Median Length 325 79