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Table 3 The effects of four exon features on the results of the K A /K S ratio test on applicable ACEs.

From: The effects of multiple features of alternatively spliced exons on the K A /K S ratio test

Exon features

 

Mean K A /K S

# Pass

# Fail

% Fail

P-value*

A: length

≤ 100 bp

0.300

65

14

17.7

< 0.05

 

> 100 bp

0.172

165

15

8.3

 

B: domain-overlapping

No

0.293

64

16

20.0

< 0.01

 

Yes

0.174

166

13

7.26

 

C: inclusion level

Non-major

0.267

58

13

18.3

< 0.05

 

Major

0.190

172

16

8.5

 

D: ESE frequency

Low

0.226

116

16

12.1

> 0.1

   by ESEfinder

High

0.196

114

13

10.2

 

   by RESCUE-ESE

Low

0.186

128

13

9.2

> 0.1

 

High

0.241

102

16

13.6

 

   by PESE

Low

0.178

127

12

8.6

> 0.1

 

High

0.249

103

17

14.2

 
  1. *Comparison of numbers of passing-test and failing-test exons by two-tailed Fisher's exact test.