BMC Bioinformatics

Table 8 Standard deviation of the DE-genes. The estimated overall standard deviation of the DE-genes as defined in Relation 3.

From: Evaluation of microarray data normalization procedures using spike-in experiments

Scanning procedure	Censuring value	Procedure
		Complete filtration		Partial filtration		No filtration
		No ba	Ba	No ba	Ba	No ba	Ba	Ba+C
		I	II	IV	V	VII	VIII	IX
70 scan	1	0.40	0.55	0.46	0.71	0.46	0.61	0.73
	8		0.50		0.73		0.59	0.69
	64		0.52		0.57		0.54	0.56
	512		0.30		0.28		0.29	0.28
80 scan	1	0.38	0.46	0.51	0.61	0.49	0.59	0.60
	8		0.44		0.66		0.56	0.58
	64		0.43		0.62		0.56	0.58
	512		0.52		0.54		0.53	0.53
90 scan	1	0.41	0.53	0.49	0.59	0.46	0.59	0.60
	8		0.52		0.62		0.57	0.58
	64		0.46		0.60		0.52	0.53
	512		0.49		0.59		0.56	0.57
100 scan	1	0.40	0.53	0.44	0.58	0.39	0.61	0.61
	8		0.53		0.61		0.61	0.61
	64		0.51		0.60		0.58	0.58
	512		0.47		0.58		0.53	0.53
RLS 90	1	0.42	0.52	0.50	0.59	0.47	0.59	0.60
	8		0.51		0.62		0.57	0.58
	64		0.46		0.60		0.52	0.53
	512		0.50		0.59		0.57	0.58
RLS 100	1	0.41	0.49	0.48	0.58	0.46	0.60	0.60
	8		0.49		0.61		0.59	0.59
	64		0.48		0.60		0.56	0.57
	512		0.44		0.59		0.52	0.53
CM	1	0.42	0.39	0.48	0.48	0.48	0.47	0.48
	8		0.39		0.51		0.51	0.51
	64		0.47		0.49		0.51	0.51
	512		0.26		0.26		0.25	0.25

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