Table 5 Genes with altered change calls following four days of Ras activation after adjusting for compartment size changes.
From: Computational expression deconvolution in a complex mammalian organ
Affy ID | Symbol | Gene name | Pre-adj | Post-adj |
|---|---|---|---|---|
161497_f_at | Itga7 | integrin alpha 7 | Down | Up |
99536_at | Cib2 | calcium and integrin binding family member 2 | Down | Up |
103577_at | Pfkfb3 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 | Down | Up |
101015_s_at | Ifnar2 | interferon (alpha and beta) receptor 2 | Down | Up |
98452_at | Flt1 | FMS-like tyrosine kinase 1 | Down | Up |
93645_at | Rgs7 | regulator of G protein signaling 7 | Down | Up |
99148_at | Fh1 | fumarate hydratase 1 | Down | Up |
103556_at | Angptl2 | angiopoietin-like 2 | Down | Up |
98418_at | Dvl1 | dishevelled, dsh homolog 1 (Drosophila) | Down | NC |
98447_at | Cebpa | CCAAT/enhancer binding protein (C/EBP), alpha | Down | NC |
93392_at | Ucp3 | uncoupling protein 3, mitochondrial | Down | NC |
102016_at | Fsp27 | fat specific gene 27 | Down | NC |
100567_at | Fabp4 | fatty acid binding protein 4, adipocyte | Down | NC |
98527_at | Dci | dodecenoyl-Coenzyme A delta isomerase | Down | NC |
98444_g_at | Lep | leptin | Down | NC |
97926_s_at | Pparg | peroxisome proliferator activated receptor gamma | Down | NC |
101017_at | Cdk4 | cyclin-dependent kinase 4 | Up | Down |
93536_at | Bax | Bcl2-associated X protein | Up | Down |
100498_g_at | Stx3 | syntaxin 3 | Up | Down |
102736_at | Ccl2 | chemokine (C-C motif) ligand 2 | Up | Down |
98433_at | Bid | BH3 interacting domain death agonist | Up | Down |
102976_at | Brca1 | breast cancer 1 | Up | NC |
102911_at | Brca2 | breast cancer 2 | Up | NC |
101009_at | Krt2-8 | keratin complex 2, basic, gene 8 | Up | NC |
95412_at | Pdcd6 | programmed cell death 6 | Up | NC |
104275_g_at | Trp53 | transformation related protein 53 | Up | NC |
94448_at | Bcl10 | B-cell leukemia/lymphoma 10 | Up | NC |
94270_at | Krt1-18 | keratin complex 1, acidic, gene 18 | Up | NC |
99085_at | Usp3 | ubiquitin specific protease 3 | Up | NC |
103238_at | Wnt4 | wingless-related MMTV integration site 4 | NC | Down |
93515_at | Cdh16 | cadherin 16 | NC | Down |
160430_at | Catnb | catenin beta | NC | Down |
97766_at | Ros1 | Ros1 proto-oncogene | NC | Down |
102852_at | Cdh2 | cadherin 2 | NC | Down |
92550_at | Krt1-19 | keratin complex 1, acidic, gene 19 | NC | Down |
99670_at | Bad | Bcl-associated death promoter | NC | Down |
92907_at | Ocln | occludin | NC | Down |
101433_at | Mr1 | major histocompatibility complex, class I-related | NC | Down |
92752_r_at | Wnt10b | wingless related MMTV integration site 10b | NC | Down |
94394_at | Rras | Harvey rat sarcoma oncogene, subgroup R | NC | Up |
92256_at | Ctsb | cathepsin B | NC | Up |
95663_at | Mmp2 | matrix metalloproteinase 2 | NC | Up |
100320_at | Kpna4 | karyopherin (importin) alpha 4 | NC | Up |
97765_g_at | Ros1 | Ros1 proto-oncogene | NC | Up |
162023_f_at | Thbd | thrombomodulin | NC | Up |
104146_at | Rasip1 | Ras interacting protein 1 | NC | Up |
98813_at | Rel | reticuloendotheliosis oncogene | NC | Up |
99558_at | Ccnc | cyclin C | NC | Up |
99467_at | Rasa1 | RAS p21 protein activator 1 | NC | Up |