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Table 1 Summary of average prediction accuracies per chain (median in parentheses).

From: CRNPRED: highly accurate prediction of one-dimensional protein structures by large-scale critical random networks

SS

Q3= 80.5% (81.6)

SOV = 80.0% (81.1)

CN

Cor = 0.746 (0.768)

DevA = 0.686 (0.670)

RWCO

Cor = 0.613 (0.646)

DevA = 0.877 (0.812)

  1. SS, Secondary structure prediction: Q3 is the percentage of correct prediction.; SOV is the segment overlap measure [28].
  2. CN, Contact number prediction: Cor is the Pearson's correlation coefficient between the predicted and native CNs; DevA is the RMS error normalized by the standard deviation of the native CN [8].
  3. RWCO, Residue-wise contact order prediction: Cor and DevA are defined as for CN but calculated with predicted and native RWCOs.
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BMC Bioinformatics

ISSN: 1471-2105

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