Figure 3
From: Predicting residue-wise contact orders in proteins by support vector regression
The predicted and observed RWCO profiles for proteins integrin alpha-L (PDB code: 1mjn, chain A) and transcriptional activator GCN5 (PDB code: 1e6i, chain A). Predicted and observed RWCO values are represented by dashed red and solid blue lines, respectively. RWCO values are computed and predicted with a radius cutoff of 12 Å. (A) integrin alpha-L is predicted with a correlation coefficient of 0.81 and a root mean square error of 2.35; (B) Transcriptional activator GCN5 is predicted with a correlation coefficient of 0.61 and a root mean square error of 2.69.