From: Grouping Gene Ontology terms to improve the assessment of gene set enrichment in microarray data
FatiGO Rank: GO node | Membership of POSOC groups | POSOC group significant at 5%? |
---|---|---|
1: response to external stimulus | IA | Â |
2: response to pest, pathogen or parasite | response to pest, pathogen or parasite | yes |
3: response to wounding | response to wounding | yes |
4: organismal movement | IA | Â |
5: response to biotic stimulus | IA | Â |
6: neurophysiological process | - | Â |
7: response to stress | IA | Â |
8: inflammatory response | immune response | yes |
 | response to pest, pathogen or parasite | yes |
 | response to wounding | yes |
9: transmission of nerve impulse | - | Â |
10: neuromuscular physiological process | - | Â |
11: defense response | IA | Â |
12: immune response | immune response | yes |
 | response to pest, pathogen or parasite | yes |
 | response to wounding | yes |
13: chemotaxis | immune response | yes |
 | response to pest, pathogen or parasite | yes |
 | cell migration | no |
 | chemotaxis | no |
 | response to wounding | yes |
14: nucleobase, nucleoside, nucleotide and nucleic acid metabolism | - | Â |
15: cell-cell signalling | - | Â |