Table 6 POSOC membership for top FatiGO terms for the Cd36 data set.
From: Grouping Gene Ontology terms to improve the assessment of gene set enrichment in microarray data
| FatiGO Rank: GO node | Membership of POSOC groups | POSOC group significant at 5%? |
|---|---|---|
| 1: response to external stimulus | IA | |
| 2: response to pest, pathogen or parasite | response to pest, pathogen or parasite | yes |
| 3: response to wounding | response to wounding | yes |
| 4: organismal movement | IA | |
| 5: response to biotic stimulus | IA | |
| 6: neurophysiological process | - | |
| 7: response to stress | IA | |
| 8: inflammatory response | immune response | yes |
| response to pest, pathogen or parasite | yes | |
| response to wounding | yes | |
| 9: transmission of nerve impulse | - | |
| 10: neuromuscular physiological process | - | |
| 11: defense response | IA | |
| 12: immune response | immune response | yes |
| response to pest, pathogen or parasite | yes | |
| response to wounding | yes | |
| 13: chemotaxis | immune response | yes |
| response to pest, pathogen or parasite | yes | |
| cell migration | no | |
| chemotaxis | no | |
| response to wounding | yes | |
| 14: nucleobase, nucleoside, nucleotide and nucleic acid metabolism | - | |
| 15: cell-cell signalling | - |