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Table 2 Score comparison

From: Whole genome association mapping by incompatibilities and local perfect phylogenies

Setup

AIC score

BIC score

HQC score

Prob. score

1000 individuals

    

1 mutation

0.0787 ± 0.118

0.0705 ± 0.111

0.068 ± 0.111

0.068 ± 0.103

2 mutations

0.061 ± 0.09

0.068 ± 0.113

0.059 ± 0.091

0.066 ± 0.103

200 individuals

    

1 mutation

0.235 ± 0.230

0.214 ± 0.227

0.219 ± 0.227

0.220 ± 0.230

2 mutations

0.148 ± 0.184

0.140 ± 0.179

0.140 ± 0.174

0.126 ± 0.174

  1. Summary of the accuracy of the four scoring functions (mean prediction error ± s.d.) in units of ρ = 40, i.e. 1.0 corresponds to a recombination rate of ρ = 40. For each simulation setup, the best performing score (measured by smallest mean prediction error) is highlighted.
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BMC Bioinformatics

ISSN: 1471-2105

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