Table 1 Class definition of virtual genomic SAGE tags
From: Accurate and unambiguous tag-to-gene mapping in serial analysis of gene expression
TAG CLASS | ||
|---|---|---|
ID | NAME | DESCRIPTION |
Pt | Platinum | TAG is unique in the genome and it matches a transcript |
Au | Gold | TAG is not unique in the genome and it matches a transcript, but other occurrences of this TAG always match intergenic regions |
Ag | Silver | TAG is unique in the genome but it matches two or more overlapping transcripts located at the same genomic region |
Al | Aluminum | TAG is not unique in the genome, it matches a transcript, but other occurrences of this TAG also match another transcript located at a different genomic region |
Cu | Copper | TAG is unique in the genome and it matches an intergenic region |
Fe | Iron | TAG is not unique in the genome, it matches an intergenic region, but other occurrences of this TAG always match an intergenic region |
Si | Silicon | TAG is not unique in the genome, it matches an intergenic region, but other occurrences of this TAG match a transcript |