Table 1 Comparison of iHAP vs other similar tools
From: iHAP – integrated haplotype analysis pipeline for characterizing the haplotype structure of genes
iHAP | GVS | TAMAL | PupaSuite | htSNPer1.0 | |
|---|---|---|---|---|---|
Integration with HapMap data? | √ | √ | √ | √ | X |
Integration of gene information? | √ | √ | √ | √ | X |
Accept user's genotype data? | X | √ | X | √ | √ |
Web-based? | √ | √ | √ | √ | X |
Force tag SNP selection? | √ | X | X | X | X |
Variety of block partitioning algorithms? | √ | X | X | X | √ |
Variety of tag SNP definitions? | √ | X | √ | X | √ |
Graphical display of blocks and genes along chromosome? | √ | X | X | X | X |
Real-time analysis? | √ | √ | X | √ | √ |