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Table 2 Examples of topic-GO associations

From: Identifying biological concepts from a protein-related corpus with a probabilistic topic model

Topic # GO ID MI GO Category GO Term Most Frequent Topic Words
278 GO:0005730 0.001439 Component nucleolus ribosom rrna pre deplet process small nucleolar biogenesi accumul nucleolu
267 GO:0005681 0.001193 Component spliceosome complex splice altern pre snrnp mrna spliceosom u2 step sap snrna
105 GO:0005816 0.00119 Component spindle pole body microtubul spindl mitot tubulin kinetochor mitosi centrosom pole centromer bodi
236 GO:0006935 0.00186 Process chemotaxis lymphocyt macrophag chemokin monocyt neutrophil inflammatori leukocyt peripher mcp cd8
156 GO:0006468 0.001514 Process protein amino acid phosphorylation kinas phosphoryl serin threonin pkc autophosphoryl casein akt catalyt ste20
267 GO:0000398 0.001404 Process nuclear mRNA splicing splice altern pre snrnp mrna spliceosom u2 step sap snrna
156 GO:0004674 0.001148 Function protein serine/threonine kinase activity kinas phosphoryl serin threonin pkc autophosphoryl casein akt catalyt ste20
267 GO:0008248 0.001463 Function pre-mRNA splicing factor activity splice altern pre snrnp mrna spliceosom u2 step sap snrna
236 GO:0008009 0.001093 Function chemokine activity lymphocyt macrophag chemokin monocyt neutrophil inflammatori leukocyt peripher mcp cd8
224 GO:0015671 5.05E-06 Process oxygen transport ha uniqu characterist featur extens character typic possess unusu exhibit
227 GO:0015213 5.00E-06 Function uridine transporter activity function defin unknown perform wide thei tissu repres consist creat