Table 8 The minimum tags in the compared libraries required for a 'significant' evaluation based on the Fisher's Exact test calculation The number of tags on the top of each column indicates the total number of ESTs in each library.
From: GO-Diff: Mining functional differentiation between EST-based transcriptomes
1000 tags | 3000 tags | 10000 tags | 50000 tags | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
Lib 1 | Lib 2 | P_value | Lib 1 | Lib 2 | P_value | Lib 1 | Lib 2 | P_value | Lib 1 | Lib 2 | P_value |
0 | 6 | 0.031 | 0 | 6 | 0.031 | 0 | 6 | 0.031 | 0 | 6 | 0.031 |
1 | 8 | 0.039 | 1 | 8 | 0.039 | 1 | 8 | 0.039 | 1 | 8 | 0.039 |
2 | 10 | 0.038 | 2 | 10 | 0.038 | 2 | 10 | 0.039 | 2 | 10 | 0.039 |
3 | 12 | 0.034 | 3 | 12 | 0.035 | 3 | 12 | 0.035 | 3 | 12 | 0.035 |
4 | 13 | 0.048 | 4 | 13 | 0.049 | 4 | 13 | 0.049 | 4 | 13 | 0.049 |
5 | 15 | 0.040 | 5 | 15 | 0.041 | 5 | 15 | 0.041 | 5 | 15 | 0.041 |
6 | 17 | 0.033 | 6 | 17 | 0.034 | 6 | 17 | 0.035 | 6 | 17 | 0.035 |
7 | 18 | 0.042 | 7 | 18 | 0.043 | 7 | 18 | 0.043 | 7 | 18 | 0.043 |
8 | 20 | 0.034 | 8 | 20 | 0.035 | 8 | 20 | 0.035 | 8 | 20 | 0.036 |
9 | 21 | 0.041 | 9 | 21 | 0.042 | 9 | 21 | 0.043 | 9 | 21 | 0.043 |