Table 3 Glycine max CAD contig comparisons. Tallies of first, second, and third position differences between contigs. Parentheses count gaps as differences. No gaps exist if numbers inside and out are the same. NS means bl2seq returned "no significant similarity." NO means bl2seq returned an alignment but the ORFs did not overlap.
From: An Automated Method for Rapid Identification of Putative Gene Family Members in Plants
| Â | Contig5 | Contig7 | Contig8 | Contig11 | Contig12 | Contig15 | Contig16 | Contig17 |
|---|---|---|---|---|---|---|---|---|
Contig2 | NS | NS | 64(64) 44(44) 117(117) | NS | NS | NS | NS | NS |
Contig5 | *** | NS | NS | NS | NS | 7(7) 11(11) 38(38) | NS | NS |
Contig7 | *** | *** | NS | NS | 8(8) 5(5) 28(28) | NS | NS | NS |
Contig8 | *** | *** | *** | NS | NS | NS | NS | NS |
Contig11 | *** | *** | *** | *** | NS | NS | NS | 23(23) 8(8) 27(27) |
Contig12 | *** | *** | *** | *** | *** | NS | NS | NS |
Contig15 | *** | *** | *** | *** | *** | *** | NS | NS |
Contig16 | *** | *** | *** | *** | *** | *** | *** | NS |