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Table 2 BLAST similarity search results against APD

From: A Fourier Transformation based Method to Mine Peptide Space for Antimicrobial Activity

 

Similar hits

% similarity

hit1

AP00402

30

 

AP00403

25

 

AP00163

24.13

hit2

AP00511

38.88

 

AP00214

38.09

 

AP00303

35.29

hit3

AP00335

31.57

 

AP00288

26.08

 

AP00072

25.92

  1. G|P is the number of Glycine|Proline residues, Naa is the number of negatively charged aminoacids, Paa is the number of positively charged aminoacids, HR is the hydrophobicity ratio, NetC is the net charge and BI is the Boman Index in kcal/mol.
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BMC Bioinformatics

ISSN: 1471-2105

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