Table 3 Posterior probability of a correct assignment for sequences in GO groups on kinase activity branch.
From: The relationship between protein sequences and their gene ontology functions
GO ID | p-value threshold | GO group description | ||||||
|---|---|---|---|---|---|---|---|---|
|  | 1 | 10-2 | 10-5 | 10-10 | 10-20 | 10-50 | 10–100 |  |
**** GO0016301(161) | 1.25 | 2.70 | 29.14 | 30.75 | 33.48 | 4.57 | 18.67 | kinase activity |
***** GO0019205(10) | 0.070 | 0.21 | 10.20 | 29.41 | 54.53 | 28.54 | 99.90 | nucleobase, nucleoside, nucleotide kinase activity |
****** GO0019201(6) | 0.039 | 0.20 | 8.11 | 19.35 | 60.00 | 33.33 | 99.98 | nucleotide kinase activity |
***** GO0004672(94) | 0.72 | 3.52 | 30.07 | 30.37 | 31.81 | 33.25 | 13.76 | protein kinase activity |
****** GO0004674(65) | 0.50 | 2.70 | 21.43 | 20.10 | 18.71 | 3.00 | 14.07 | protein serine/threonine kinase activity |
******* GO0004693(6) | 0.039 | 0.176 | 1.21 | 1.42 | 2.83 | 2.86 | 0 | cyclin-dependent protein kinase activity |
******* GO0004680(7) | 0.046 | 0.23 | 1.83 | 1.34 | 4.50 | 6.67 | 10.00 | casein kinase activity |
******* GO0004702(8) | 0.054 | 0.33 | 2.29 | 2.67 | 2.64 | 1.03 | 5.88 | receptor signaling protein serine/threonine kinase activity |
****** GO0004713(6) | 0.039 | 0.24 | 1.70 | 1.45 | 0.87 | 0 | 0 | protein-tyrosine kinase activity |
***** GO0019200(15) | 0.11 | 0.23 | 15.11 | 25.43 | 65.24 | 65.24 | 28.6 | carbohydrate kinase activity |
***** GO0001727(8) | 0.054 | 0.16 | 3.53 | 4.38 | 28.58 | 25.03 | 25.06 | lipid kinase activity |
***** GO0004428(12) | 0.085 | 0.15 | 3.21 | 4.97 | 29.39 | 29.96 | 33.22 | inositol or phosphatidylinositol kinase activity |