From: Evaluation and comparison of mammalian subcellular localization prediction methods
A) SP3763 | CELLO | MultiLoc | Proteome Analyst | pTarget | WoLFPSORT | Theoretical | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Sens | Spec | Sens | Spec | Sens | Spec | Sens | Spec | Sens | Spec | Sens | Spec | |
overall | 0.58 | 0.51 | 0.77 (0.65) | 0.49 | 0.61 | |||||||
nucleus | 0.83 | 0.63 | 0.55 | 0.79 | 0.87 (0.80) | 0.91 | 0.62 | 0.78 | 0.75 | 0.74 | 0.11 | 0.30 |
cytosol | 0.27 | 0.40 | 0.51 | 0.39 | 0.57 (0.49) | 0.56 | 0.41 | 0.40 | 0.40 | 0.41 | 0.11 | 0.17 |
mitochondrion | 0.45 | 0.51 | 0.41 | 0.53 | 0.66 (0.55) | 0.81 | 0.50 | 0.50 | 0.45 | 0.41 | 0.11 | 0.09 |
extracellular region | 0.47 | 0.82 | 0.41 | 0.81 | 0.70 (0.58) | 0.90 | 0.30 | 0.88 | 0.62 | 0.84 | 0.11 | 0.41 |
plasma membrane | 0.38 | 0.28 | 0.38 | 0.26 | 0.10 (0.07) | 0.38 | 0.42 | 0.33 | 0.45 | 0.36 | 0.11 | 0.11 |
Golgi apparatus | 0.04 | 0.80 | 0.08 | 0.08 | 0.48 (0.41) | 0.45 | 0.24 | 0.12 | 0.02 | 0.33 | 0.11 | 0.03 |
endoplasmic reticulum | 0.03 | 0.22 | 0.16 | 0.08 | 0.57 (0.43) | 0.19 | 0.32 | 0.11 | 0.05 | 0.05 | 0.11 | 0.02 |
peroxisome | 0.30 | 0.67 | 0.55 | 0.07 | 0.46 (0.30) | 0.55 | 0.55 | 0.08 | 0.05 | 0.03 | 0.11 | 0.01 |
lysosome | 0.24 | 0.10 | 0.24 | 0.05 | 0.50 (0.43) | 0.19 | 0.19 | 0.02 | 0 | 0 | 0.11 | 0.01 |
B) LOC2145 | ||||||||||||
overall | 0.44 | 0.43 | 0.56 (0.43) | 0.45 | 0.43 | |||||||
nucleus | 0.62 | 0.55 | 0.36 | 0.70 | 0.67 (0.57) | 0.92 | 0.42 | 0.71 | 0.49 | 0.71 | 0.11 | 0.26 |
cytosol | 0.23 | 0.08 | 0.39 | 0.08 | 0.63 (0.51) | 0.18 | 0.34 | 0.10 | 0.32 | 0.07 | 0.11 | 0.04 |
mitochondrion | 0.60 | 0.48 | 0.54 | 0.57 | 0.83 (0.77) | 0.80 | 0.59 | 0.43 | 0.52 | 0.43 | 0.11 | 0.08 |
extracellular region | 0.65 | 0.30 | 0.58 | 0.33 | 0.92 (0.90) | 0.34 | 0.52 | 0.52 | 0.84 | 0.33 | 0.11 | 0.10 |
plasma membrane | 0.44 | 0.57 | 0.53 | 0.76 | 0.16 (0.10) | 0.76 | 0.51 | 0.74 | 0.54 | 0.65 | 0.11 | 0.33 |
Golgi apparatus | 0.05 | 0.78 | 0.25 | 0.44 | 0.58 (0.50) | 0.73 | 0.30 | 0.33 | 0.03 | 1.00 | 0.11 | 0.07 |
endoplasmic reticulum | 0.03 | 0.83 | 0.14 | 0.27 | 0.61 (0.48) | 0.56 | 0.31 | 0.35 | 0.07 | 0.22 | 0.11 | 0.08 |
peroxisome | 0.12 | 1.00 | 0.46 | 0.17 | 0.31 (0.20) | 0.92 | 0.51 | 0.24 | 0.04 | 0.06 | 0.11 | 0.03 |
lysosome | 0.05 | 0.25 | 0.09 | 0.11 | 0.17 (0.13) | 0.50 | 0.17 | 0.09 | 0 | 0.06 | 0.11 | 0.04 |