From: Discovering structural motifs using a structural alphabet: Application to magnesium-binding sites
 | 1st-shell vs. all residues | 2nd-shell vs. all residues | ||||
---|---|---|---|---|---|---|
Letter, xa | νx,1/νx, allb | T-testc | p-valuec,d | νx,2/νx, alle | T-testc | p-valuec,d |
a | 1.47 | 1.4037 | 0.0802 | 0.57 | 2.4731 | 0.0067 |
b | 1.86 | 2.7909 | 0.0027 | 1.20 | 1.2200 | 0.1113 |
c | 0.56 | 2.0160 | 0.0219 | 0.50 | 4.3510 | <0.0001 |
d | 1.23 | 1.7376 | 0.0412 | 1.23 | 3.1829 | 0.0008 |
e | 1.46 | 1.0111 | 0.1560 | 2.03 | 4.1825 | <0.0001 |
f | 1.47 | 1.9389 | 0.0263 | 1.70 | 5.4060 | <0.0001 |
g | 1.15 | 0.2494 | 0.4015 | 1.18 | 0.5381 | 0.2953 |
h | 5.29 | 9.3752 | < 0.0001 | 1.19 | 0.7921 | 0.2142 |
i | 0 | 1.8928 | 0.0292 | 1.34 | 1.1910 | 0.1168 |
j | 2.21 | 1.6156 | 0.0531 | 1.54 | 1.3401 | 0.0901 |
k | 1.40 | 1.4992 | 0.0669 | 1.60 | 4.1820 | <0.0001 |
l | 0.76 | 0.9209 | 0.1786 | 1.08 | 0.5978 | 0.275 |
m | 0.52 | 2.9377 | 0.0017 | 0.74 | 5.2192 | <0.0001 |
n | 0.53 | 1.1306 | 0.1291 | 0.88 | 0.5208 | 0.3013 |
o | 1.52 | 1.4066 | 0.0798 | 0.35 | 3.3637 | 0.0004 |
p | 0 | 3.1174 | 0.0009 | 0.77 | 1.3204 | 0.0934 |
SSE, x | Â | Â | Â | Â | Â | Â |
Loop | 1.56 | 2.5575 | 0.0053 | 1.47 | 2.1874 | 0.0144 |
β-strands | 1.30 | 1.0780 | 0.1405 | 1.34 | 1.2170 | 0.1118 |
α-helices | 0.47 | 3.6454 | 0.0002 | 0.51 | 3.3621 | 0.0004 |