Table 8 Number of interologs and true positives predicted by InParanoid score (IP) without other feature scores.
From: Reconstruction of human protein interolog network using evolutionary conserved network
InParanoid score | Predicted interologs | True positives | Putatives | Precision | Recall |
|---|---|---|---|---|---|
IP > 0.0 | 90,871 | 2,572 | 88,299 | 2.83% | -* |
IP > 0.1 | 82,529 | 2,489 | 80,040 | 3.02% | 96.77% |
IP ≥ 0.2 | 72,266 | 2,368 | 69,898 | 3.28% | 92.07% |
IP ≥ 0.3 | 66,764 | 2,305 | 64,459 | 3.45% | 89.62% |
IP ≥ 0.4 | 60,916 | 2,214 | 58,702 | 3.63% | 86.08% |
IP ≥ 0.5 | 54,481 | 2,134 | 52,347 | 3.92% | 82.97% |
IP ≥ 0.6 | 49,778 | 2,069 | 47,709 | 4.16% | 80.44% |
IP ≥ 0.7 | 44,531 | 1,986 | 42,545 | 4.46% | 77.22% |
IP ≥ 0.8 | 41,354 | 1,958 | 39,396 | 4.73% | 76.13% |
IP ≥ 0.9 | 38,984 | 1,930 | 37,054 | 4.95% | 75.04% |
IP = 1.0 | 36,376 | 1,918 | 34,458 | 5.27% | 74.57% |