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Table 8 Number of interologs and true positives predicted by InParanoid score (IP) without other feature scores.

From: Reconstruction of human protein interolog network using evolutionary conserved network

InParanoid score Predicted interologs True positives Putatives Precision Recall
IP > 0.0 90,871 2,572 88,299 2.83% -*
IP > 0.1 82,529 2,489 80,040 3.02% 96.77%
IP ≥ 0.2 72,266 2,368 69,898 3.28% 92.07%
IP ≥ 0.3 66,764 2,305 64,459 3.45% 89.62%
IP ≥ 0.4 60,916 2,214 58,702 3.63% 86.08%
IP ≥ 0.5 54,481 2,134 52,347 3.92% 82.97%
IP ≥ 0.6 49,778 2,069 47,709 4.16% 80.44%
IP ≥ 0.7 44,531 1,986 42,545 4.46% 77.22%
IP ≥ 0.8 41,354 1,958 39,396 4.73% 76.13%
IP ≥ 0.9 38,984 1,930 37,054 4.95% 75.04%
IP = 1.0 36,376 1,918 34,458 5.27% 74.57%
  1. * : the predicted data set do not contain negative data to calculate false negative (FN) to obtain recall = (TP/(TP+FN))