Table 5 Domain-domain interaction scores for the pairs that appear in the iPfam database*
From: A domain-based approach to predict protein-protein interactions
Domain Name (Pfam ID) | Domain Name (Pfam ID) | Mean Score a (Inclusive/Closed set) |
|---|---|---|
PNPase (PF03726) | RNase_PH (PF01138) | 7.61/7.48 |
GTP_EFTU (PF00009) | GTP_EFTU (PF00009) | 7.57 |
Ribosomal_L6 (PF00347) | Ribosomal_L6 (PF00347) | 7.56 |
CK_II_beta (PF01214) | CK_II_beta (PF01214) | 7.56/7.49 |
Prenyltrans (PF00432) | PPTA (PF01239) | 7.53 |
Ribosomal_S8 (PF00410) | Ribosomal_S2 (PF00318) | 7.52 |
TPR_1 (PF00515) | TPR_1 (PF00515) | 7.52 |
Ribosomal_S11 (PF00411) | Ribosomal_S7e (PF01251) | 7.52/7.50 |
IF-2B (PF01008) | IF-2B (PF01008) | 7.51/7.49 |
CK_II_beta (PF01214) | Pkinase (PF00069) | 7.49 |
Ribosomal_S2 (PF00318) | Ribosomal_S2 (PF00318) | 7.49 |
Bromodomain (PF00439) | Bromodomain (PF00439) | 7.48/5.66 |
WD40 (PF00400) | G-gamma (PF00631) | 7.48/1.97* |
Ribosomal_L4 (PF00573) | Ribosomal_L37e (PF01907) | 7.48 |
G-alpha (PF00503) | WD40 (PF00400) | 7.46 |
PFK (PF00365) | PFK (PF00365) | 7.45 |
Ribosomal_S8e (PF01201) | Ribosomal_S2 (PF00318) | 7.44 |
GTP_EFTU (PF00009) | EF1_GNE (PF00736) | 7.43 |
Proteasome (PF00227) | Proteasome (PF00227) | 6.26/6.11 |
ATP-synt_ab (PF00006) | ATP-synt_C (PF00137) | 5.86 |
Clat_adaptor_s (PF01217) | Adaptin_N (PF01602) | 5.40 |
Ribosomal_L4 (PF00573) | Ribosomal_L15e (PF00827) | 5.38 |
Glyco_transf_20 (PF00982) | Glyco_transf_20 (PF00982) | 5.33 |
Ribosomal_L24e (PF01246) | Ribosomal_L14e (PF01929) | 5.30/5.39 |
Prefoldin (PF02996) | KE2 (PF01920) | 4.91 |
Proteasome (PF00227) | AAA (PF00004) | 4.75/4.92 |
Pkinase (PF00069) | Pkinase (PF00069) | 2.43* |
WD40 (PF00400) | WD40 (PF00400) | 2.11/2.04* |
RRM_1 (PF00076) | RRM_1 (PF00076) | 2.07* |
Pkinase (PF00069) | Ank (PF00023) | 2.05* |
Myb_DNA_binding (PF00249) | Myb_DNA_binding (PF00249) | 2.04* |
WD40 (PF00400) | PH (PF00169) | 1.92/2.04* |
Ank (PF00023) | Ank (PF00023) | 1.87* |