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Table 1 The prediction performances

From: High-throughput identification of interacting protein-protein binding sites

 

Accuracy for interacting binding sites, also known as recall (%)

Accuracy for non-interacting binding sites (%)

Average accuracy (%)

Precision (%)

Mix1

87.4

68.6

78.0

73.6

Mix1 (sequence window)

88.7

63.3

76.0

70.8

Mix1 (putative binding sites)

87.3

67.6

77.4

72.9

Homo-dimers2

96.4

67.5

81.9

74.8

Hetero-dimers2

66.3

62.8

64.5

64.0

  1. 1 The mixed data set of homo-dimer and hetero-dimer interfaces.
  2. 2 The data set of homo-dimer and hetero-dimer interfaces were separately trained and tested.
  3. The prediction was performed using the default input features (sequence profile with a surface patch size 3).
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BMC Bioinformatics

ISSN: 1471-2105

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