Table 3 Average correlations between expression levels of genes in a TM and the expression levels of associated TFs.

FKH1

1

Cell Cycle

0.53

0.001

MCM1

1

Cell Cycle

0.14

0.007

INO4

1

Cell Cycle

0.22

0.029

GCN4

2

Amio Acid Metabolism

0.09

0.539

CBF1

2

Amio Acid Metabolism

0.17

0.079

MET4

2

Amio Acid Metabolism

0.00

0.497

INO4

2

Amio Acid Metabolism

0.33

0.001

MET31

2

Amio Acid Metabolism

-0.14

0.789

SWI4

3

Cell Cycle

0.01

0.689

MCM1

3

Cell Cycle

0.04

0.079

FKH2

3

Cell Cycle

-0.24

0.001

INO4

3

Cell Cycle

0.48

0.001

NDD1

3

Cell Cycle

0.39

0.001

GLN3

4

Sporulation

-0.21

0.001

YFL044C

4

Sporulation

0.09

0.6

RCS1

4

Sporulation

-0.37

0.001

HAP3

5

Protein Biosynthesis

0.12

0.003

RCS1

5

Protein Biosynthesis

-0.24

0.001

ARG80

5

Protein Biosynthesis

0.09

0.142

MBP1

6

Cell Cycle

-0.02

0.858

SWI4

6

Cell Cycle

0.02

0.841

SKN7

6

Cell Cycle

-0.12

0.882

ASH1

6

Cell Cycle

0.24

0.156

ACE2

6

Cell Cycle

-0.13

0.003

SWI6

6

Cell Cycle

0.12

0.227

STB1

6

Cell Cycle

0.15

0.001

SUM1

7

Sporulation

0.23

0.001

PHO4

7

Sporulation

0.39

0.001

MBP1

8

Cell Cycle

-0.29

0.001

DOT6

8

Cell Cycle

0.16

0.001

SWI4

8

Cell Cycle

0.32

0.001

SWI6

8

Cell Cycle

0.03

0.445

SUM1

9

Sporulation

0.26

0.001

PDR1

10

Protein Biosynthesis

-0.18

0.001

MET4

10

Protein Biosynthesis

0.06

0.001

RAP1

10

Protein Biosynthesis

-0.17

0.001

FHL1

10

Protein Biosynthesis

0.04

0.001