Table 4 Comparison of the algorithms on the 153 SAGE tags
From: Measuring similarities between gene expression profiles through new data transformations
Algorithm | Number of tags in incorrect clusters | % of tags in incorrect clusters | Adjusted Rand Index |
|---|---|---|---|
TransChisq | 12 | 7.8 | 0.822 |
PCAChisq | 12 | 7.8 | 0.825 |
PoissonC | 22 | 14.4 | 0.725 |
PearsonC | 26 | 17.0 | 0.664 |
Eucli | NA | NA | 0.003 |
Eucli on rescaled data | 38 | 24.8 | 0.675 |
SRC | NA | NA | 0.347 |