From: Automatic generation of 3D motifs for classification of protein binding sites
Pattern | Rep. | Ligand | Size | Atoms | Function | EC | CATH | DALI | IPR | PS |
---|---|---|---|---|---|---|---|---|---|---|
ADP0 | 1vom | ADP | 6 | 11 | Myosin | / | 1.10.162.10 1.10.183.10 1.10.465.10 3.30.538.10 | 1237 | 001093 001609 | Â |
ADP1 | 1q0b | ADP | 7 | 7 | Kinesin | / | 3.40.850.10 | 1236 | 001752 | 50067 00411 |
ADP2 | 1b62 | ADP | 10 | 8 | Â | Â | 3.30.565.10 | (846, 847, 848) | 003594 | Â |
ADP3 | 1qf9 | ADP | 8 | 23 | Transferase | 2.7. (2.7.1., 2.7.4.) | 3.40.50.300 | Â | Â | Â |
ADP4 | 1ehi | ADP | 5 | 18 | Ligase (60%) Transferase (40%) | Â | 3.30. | Â | Â | Â |
ADP5 | 1njf | ADP | 4 | 17 | Â | Â | 1.10.8.60 3.40.50.300 | 1062 | 003593 | Â |
ADP6 | 1oxu | ADP | 5 | 6 | Abc transporter | / | 3.40.50.300 | 1069 1071 | 003593 003439 | 00211 50893 |
AMP0 | 1v26 | AMP | 4 | 27 | Ligase | Â | 2.30.38.10 3.30.300.30 3.40.50.980 | 736 992 | 000873 | 00455 |
ATP0 | 1y8q | ATP | 3 | 71 | Ligase | ND | 3.40.50.70 | 851 | 000205 000594 | Â |
AxP0 | 2a40 | ADP ATP | 13 | 42 | Actin (85%) Heat shock (15%) | / | 3.30.420.40 3.90.640.10 | 1175 | Â | Â |
AxP1 | 1j1c | ADP ATP | 20 | 45 | Kinase | 2.7.1. | 1.10.510.10 3.30.200.20 | 593 | 000719 | 50011 |
AxP2 | 1ses | AMP ATP | 8 | 51 | Ligase | 6.1.1. | 3.30.930.10 | 1116 | Â | 50862 |
AxP3 | 1o97 | AMP ATP | 7 | 42 | Â | Â | 3.40.50.620 | (973 974 975) | Â | Â |