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Table 5 The performances of existing methods on dataset used in this study

From: Support Vector Machine-based method for predicting subcellular localization of mycobacterial proteins using evolutionary information and motifs

Methods

Predicted Locations

Cytoplasmic [340]

Intergral Membrane [402]

Secretory [50]

Membrane -attached [60]

PSORTB

Cytoplasm

300 (88%)

20

3

4

 

Extracellular

2

4

40 (80%)

4

 

Cytoplasmic Membrane

3

326 (81%)

0

11 (18%)

 

Cell Wall

0

1

0

1

 

Unknown

35

51

7

40

PA-SUB

Cytoplasm

323 (95%)

31

0

0

 

Extracellular

1

117

50 (100%)

50

 

Plasma Membrane

1

0 (0%)

0

10 (17%)

 

No-positive

15

254

0

0

TMHMM

Membrane

1

354 (88%)

40

14 (23%)

 

Non-Membrane

339

48

10

46