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Table 2 Comparison of association databases

From: PADB : Published Association Database

 

Data coverage

Search type

Special content

Data presentation

Database

genetic risk factors

environmental risk factors

all research area

free text

controlled vocabulary

sample size information

systematic analysis results

sorting by risk measures

link to HapMap database

link to pathway database

PADB

O

O

O

O

X

X

X

O

O

O

GAD

O

Partial

O

O

X

Partial

X

X

O

O

HPLD

O

Partial

O

Partial

O

Partial

X

X

X

X

Cochrane

Partial

O

O

O

X

O

O

X

X

X

AlzGene

O

X

X

O

X

O

O

X

X

X

T1DBase

O

X

X

O

X

X

X

X

X

O

PharmGKB

O

X

X

O

Partial

X

X

X

X

O

CGEMS

O

X

X

X

X

O

O

X

X

X

NINDS

O

X

X

X

X

O

O

X

X

X

dbGaP

O

X

X

X

X

O

O

X

X

X

  1. PADB was compared with other association databases, including those for general associations (GAD, HPLD and the Cochrane Reviews), genetic associations for specific diseases (AlzGene, T1Dbase and PharmGKB) and genome-wide associations (CGEMS, NINDS and dbGaP).