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Table 2 Alignment Length and Gap Percentage and by Alignment Tool

From: Improving model construction of profile HMMs for remote homology detection through structural alignment

  Length (residues) Gap%
CLUSTALW 318 41
TCOFFEE 474 59
MAFFT 382 51
PROBCONS 540 59
3DCOFFEE 495 60
MAMMOTH 413 53