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Figure 3 | BMC Bioinformatics

Figure 3

From: BGX: a Bioconductor package for the Bayesian integrated analysis of Affymetrix GeneChips

Figure 3

Distributions of λ for each probe affinity category. Colour-coded density plot of the λ c r α ( g , j ) MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGacaGaaiaabeqaaeqabiWaaaGcbaacciGae83UdW2aa0baaSqaaiabdogaJjabdkhaYbqaaiab=f7aHjabcIcaOiabdEgaNjabcYcaSiabdQgaQjabcMcaPaaaaaa@3757@ parameter of an analysis of the Golden Spike data set. As probe affinity categories increase, the distributions shift from left to right. The black density line is the λ cr distribution from the original BGX model and illustrates the discriminatory power of the probe affinity extension.

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