Figure 4
From: WeederH: an algorithm for finding conserved regulatory motifs and regions in homologous sequences
WeederH output on the 500 bp promoter of the ADH1B gene (as defined in the ABS database). Top three motifs output by WeederH (top track), ABS annotated sites (in green), sequence of the ABS database (obtained by BLAT search) and predictions according to RP score [27], light blue) and phastCons ([45], bottom track). Notice how neither of the latter two methods reports anything significantly conserved in the core promoter itself, where motifs are located.