Table 4 Distribution of cluster sizes for the Gavin02 data
From: Identifying protein complexes directly from high-throughput TAP data with Markov random fields
MCL | MCL with inter. prob. | MRF (spoke) | MRF (matrix) | MCODE | |
|---|---|---|---|---|---|
Num. of clusters | 351 | 352 | 393 | 310 | 24 |
Num. of singletons | 177 | 178 | 226 | 79 | 0 |
Size ≥ 2 | 174 | 174 | 167 | 231 | 24 |
Mean | 6.97 | 6.97 | 6.97 | 5.67 | 4.67 |
Median | 4 | 5 | 5 | 2 | 4 |
1st quantile | 3 | 3 | 2 | 2 | 3 |
3rd quantile | 8 | 8 | 10 | 6 | 6 |
90% | 15 | 14 | 14 | 13 | 7 |
99% | 42 | 40 | 34 | 36 | 9 |
Largest cluster | 51 | 45 | 36 | 44 | 11 |