Table 5 Comparison of multidomain proteins with individual domains
From: Comparison of protein structures by growing neighborhood alignments
PDBid1 – PDBid2 | Seq Nbhd LAli/RMSD | Struct Nbhd LAli/RMSD | DALI LAli/RMSD | CE Lali/RMSD | SSM LAli/RMSD |
|---|---|---|---|---|---|
2hck(438) – d2hcka1(63) | 63/0.0 | 63/0.0 | 63/0.0 | 63/0.0 | 63/0.0 |
2hck(438) – d2hcka2(103) | 103/0.0 | 103/0.0 | 103/0.0 | 103/0.0 | 103/0.0 |
2hck(438) – d2hcka3(272) | 272/0.0 | 272/0.0 | 272/0.0 | 272/0.0 | 272/0.0 |
2hck(438) – mixed (60) | 60/0.0 | 60/0.0 | -/- | 16/0 | 60/0.0 |