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Figure 3 | BMC Bioinformatics

Figure 3

From: IDconverter and IDClight: Conversion and annotation of gene and protein IDs

Figure 3

Input and output possibilities for the four tools compared. Description of the allowed input IDs and those IDs they can be converted to, for MatchMiner (M), SOURCE (S), Onto-Translate (O), and IDconverter (I). Notes: 1 M: cDNA, FISH-mapped BAG; 2 M: Cytogenetic location as input. Cytogenetic location from UCSC, transcription start and end bp; 3 S: Chromosome Location, Cytoband; 4 O: 18 Affymetrix arrays; 5 O: dbest gi, seq id, protein gi; 6 O: Agilent (5 arrays), Amersham (3), Clonetech(22), Operon (3), Perkin Elmer (5), Sigmagenosys (2), Superarray (86), Takara (6); I: Location from Ensembl and UCSC (start bp, end bp, chromosome and strand).

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