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Table 2 Variable ranking.

From: Inferring biological networks with output kernel trees

Protein-protein interactions

Metabolic network

#

Att.

Imp

#

Att.

Imp

1

loc – nucleolus

0.021

1

phy – dre

0.011

2

expr (Spell.) – elu 120

0.013

2

phy – rno

0.009

3

loc – cytoplasm

0.012

3

expr (Eisen) – cdc15 120 m

0.008

4

expr (Eisen) – sporulation ndt80 early

0.012

4

phy – ecu

0.008

5

loc – nucleus

0.012

5

expr (Eisen) – cdc15 160 m

0.008

6

expr (Eisen) – sporulation 30 m

0.011

6

phy – pfa

0.007

7

expr (Eisen) – sporulation ndt80 middle

0.010

7

phy – mmu

0.007

8

expr (Spell.) – alpha 14

0.010

8

loc – cytoplasm

0.006

9

expr (Spell.) – elu 150

0.010

9

expr (Eisen) – cdc15 30 m

0.005

10

loc – mitochondrion

0.009

10

expr (Eisen) – elutriation 5.5 hrs

0.005

  1. Variable rankings obtained with expressions, phylogenetic profiles, and localization data used as inputs to extra-trees.