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Table 3 OAZ sequence variants in dbEST

From: Ornithine decarboxylase antizyme finder (OAF): Fast and reliable detection of antizymes with frameshifts in mRNAs

Species

OAZ type

EST

Complete

Partial

Origin

Argopecten irradians*

OAZ (M)

CF197657

1

2

Allele

Argopecten irradians*

OAZ (M)

CK484346

1

2

Allele

Danio rerio

OAZ1S

CA787369

27

3+

Allele

Danio rerio

OAZ1S

CD760042

57

3+

Allele

Gasterosteus aculeatus*

OAZ1S

DN717815

15

3+

Allele

Gasterosteus aculeatus*

OAZ1S

DN722004

8

3+

Allele

Hydra magnipapillata*

OAZ (M)

BP515897

3

3+

Allele

Hydra magnipapillata*

OAZ (M)

DT613005

5

3+

Allele

Macaca nemestrina

OAZ1

DR772378

2

3+

Allele

Macaca nemestrina

OAZ1

EB520932

2

3+

Allele

Mus musculus

OAZ2

BQ713320

7

3+

Allele

Mus musculus

OAZ2

CB196396

6

3+

Allele

Oncorhynchus mykiss*

OAZ1L

BX856931

1

1

Duplication

Oncorhynchus mykiss*

OAZ1L

CA376808

0

2

Duplication

Oncorhynchus mykiss*

OAZ1S

CA348102

4

3+

Allele

Oncorhynchus mykiss*

OAZ1S

CA357487

1

3+

Allele

Oncorhynchus tshawytscha*

OAZ1S

CA345360

0

3+

Duplication

Oncorhynchus tshawytscha*

OAZ1S

CX352386

1

2

Duplication

Pimephales promelas*

OAZ1L

DT246851

7

3+

Allele

Pimephales promelas*

OAZ1L

DT260869

4

3+

Allele

Pimephales promelas*

OAZ1L

DT262889

2

3+

Allele

Pimephales promelas*

OAZ1L

DT346263

3

3+

Allele

Pimephales promelas*

OAZ1L

DT359488

2

3+

Allele

Pimephales promelas*

OAZ2

DT117815

6

3+

Allele

Pimephales promelas*

OAZ2

DT135205

4

3+

Allele

Rattus norvegicus

OAZ2

CK366765

6

3

Allele

Rattus norvegicus

OAZ2

CV105321

2

3

Allele

Salmo salar*

OAZ1S

DW536698

7

3+

Duplication

Salmo salar*

OAZ1S

DY726570

3

3+

Duplication

Taeniopygia guttata*

OAZ2

DV947965

1

2

Allele

Taeniopygia guttata*

OAZ2

DV961695

1

2

Allele

  1. Summary of OAZ sequence variants. Names of organisms are shown in the first column. The second column shows OAZ classification according to OAF clustering. The third column lists accession numbers for representative ESTs. The fourth column shows a number of EST sequences containing complete OAZ CDS. The fifth column shows a number of ESTs containing a partial OAZ CDS. Likely reasons for the existence of OAZ variants are given in the last column. Asterisks indicate no complete genome sequence for the corresponding organism, meaning that our assessment of variant origin is presumptive.