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Table 2 The KKA dataset.

From: Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework

Family name Rfam accession # Mean length % identity
5S_rRNA RF00001 116 57
5_8S_rRNA RF00002 154 61
IRES_HCV RF00061 261 94
Lysine RF00168 181 49
RFN RF00050 140 66
Retroviral_psi RF00175 117 92
SECIS RF00031 64 41
SRP_bact RF00169 93 47
SRP_euk_arch RF00017 291 40
S_box RF00162 107 66
T-box RF00230 244 45
THI RF00059 105 55
U1 RF00003 157 59
U2 RF00004 182 62
UnaL2 RF00436 54 73
sno_14q_I_II RF00181 75 64
tRNA RF00005 73 45
Average   142 59
  1. The length and identity values were taken from Table 1 in Kiryu et al. [32].