Algorithm | Parameters | Execution Time (s) |
---|---|---|
SSAHA | maxGap = 0, | 118.58 |
maxInsert = 0 | ||
maxGap = 20, | 118.72 | |
maxInsert = 20 | ||
Basic | 97.98 | |
Batch merging | c = 16 | 113.03 |
c = 32 | 84.35 | |
c = 64 | 71.09 | |
Recursive merging | 80.55 | |
Hashtable | h = 12 | 56.02 |
h = 13 | 56.24 | |
h = 14 | 57.92 |