Discovering functional interaction patterns in protein-protein interaction networks

BMC Bioinformatics

Table 4 Comparison of all the patterns with random patterns in terms of overlap with transport and signaling pathways

PPI Network	*cpoverlap* of Frequent Patterns		*cpoverlap* of Random Patterns
	Mean	Standard Deviation	Mean	Standard Deviation
DIP	0.982	0.050	0.959	0.013
STRING	0.979	0.033	0.991	0.014
WI-PHI	0.982	0.043	0.948	0.017

The average cpoverlap measure for all the patterns discovered in DIP, STRING, and WI-PHI networks compared to the average cpoverlap measure of random patterns of same topology with respect to the transport and signaling pathways.

ISSN: 1471-2105