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Table 1 Classification accuracy of mixed-plasmid data using hierachical clustering with five sample (plasmid) clusters. PA is the prediction accuracy.

From: A Java-based tool for the design of classification microarrays

  Number of clusters of probes, κ
  2 5 10 20 30 40
Number of top-ranked probes PA (%) No. of probes PA (%) No. of probes PA (%) No. of probes PA (%) No. of probes PA (%) No. of probes PA (%) No. of probes
100 72.09 2 72.09 5 72.09 10 69.77 19 69.77 29 69.77 32
150 86.05 2 93.02 5 95.35 10 95.35 20 95.35 29 95.35 36
200 74.42 2 90.70 5 93.02 10 93.02 20 93.02 30 95.35 35
250 76.74 2 95.35 5 95.35 10 95.35 20 95.35 30 90.70 34
300 46.51 2 88.37 5 93.02 10 93.02 20 93.02 30 90.70 35
350 76.74 2 93.02 5 93.02 10 95.35 20 95.35 30 95.35 33
400 69.77 2 93.02 5 90.70 10 93.02 20 90.70 30 93.02 35