Skip to main content

Table 3 Number of significant pairs per window size

From: Determining significance of pairwise co-occurrences of events in bursty sequences

 

C

D

 

UL

FL

FL(r)

UL

FL

FL(r)

w

0.01

0.001

0.01

0.001

0.01

0.001

0.01

0.001

0.01

0.001

0.01

0.001

100

90

44

67

31

70

23

102

55

89

40

63

20

300

134

68

108

60

96

41

143

71

123

62

87

40

500

151

80

130

67

107

39

171

83

142

72

106

37

  1. Number of significant pairs for 10 Mbp regions in human chromosome 1. Results are shown for window sizes w ∈ {100, 300, 500} and two p-value thresholds, for null models UL, FL, and FL(r), for co-occurrence scores C and D. Minimum distance parameter was d = 20 bp. Number of event types is 115, and thus the total number of undirected pairs is 6670 and number of directed pairs is 13225.
Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us