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Table 1 SynBlast results for Danio rerio, Ensembl release 46 (Zv7), with the human Hox clusters as query.

From: SynBlast: Assisting the analysis of conserved synteny information

Reference DrAa
chr.19
10.5 M
DrAb
chr.16
16 M
DrBa
chr.3
23 M
DrBb
chr.12
26.5 M
DrCa1
chr.23
33.7 M
DrCa2
chr.23
35.2 M
DrCb
chr.11
0.6 M
DrDa
chr.9
2 M
HsA 2.58 3.29 -0.76 -0.39 -1.98 -1.98 -0.4 -0.74
HOXA9 5581 4073 4690 2119 3322 3318 1490 3269
chr.7 2/1 1/3 7/2 3/7 9/4 10/5 4/8 6/6
HsB -1.14 -0.01 3.13 0.42 -1.66 -1.69 -0.64 -0.48
HOXB9 2702 1342 6201 1647 3008 2982 1003 1678
chr.17 6/4 3/7 1/1 2/6 7/2 8/3 5/8 4/5
HsC -0.89 -1.51 -0.26 -0.34 6.44 7.58 0.22 -2.51
HOXC9 2361 2323 3108 1346 8687 6537 4150 3798
chr.12 7/6 8/7 5/5 6/8 2/1 1/2 3/3 9/4
HsD -0.92 -0.63 -0.85 -0.6 -0.41 -0.41 -0.71 1.76
HOXD9 2799 1811 2660 871 3017 3013 1303 4326
chr.2 8/4 5/6 7/5 4/8 3/2 2/3 6/7 1/1
  1. The logRatioSum score, the gene order alignment score, and the corresponding ranks are given. Putative orthologs are depicted in bold. In combination, the two scores provide the best means to rank orthologous loci at the top. In most cases, identification of orthologous regions is unambiguous. For completeness we list both copies of the artifactually duplicated DrCa cluster of chr.23.