Table 1 SynBlast results for Danio rerio, Ensembl release 46 (Zv7), with the human Hox clusters as query.
From: SynBlast: Assisting the analysis of conserved synteny information
Reference | DrAa chr.19 10.5 M | DrAb chr.16 16 M | DrBa chr.3 23 M | DrBb chr.12 26.5 M | DrCa1 chr.23 33.7 M | DrCa2 chr.23 35.2 M | DrCb chr.11 0.6 M | DrDa chr.9 2 M |
|---|---|---|---|---|---|---|---|---|
HsA | 2.58 | 3.29 | -0.76 | -0.39 | -1.98 | -1.98 | -0.4 | -0.74 |
HOXA9 | 5581 | 4073 | 4690 | 2119 | 3322 | 3318 | 1490 | 3269 |
chr.7 | 2/1 | 1/3 | 7/2 | 3/7 | 9/4 | 10/5 | 4/8 | 6/6 |
HsB | -1.14 | -0.01 | 3.13 | 0.42 | -1.66 | -1.69 | -0.64 | -0.48 |
HOXB9 | 2702 | 1342 | 6201 | 1647 | 3008 | 2982 | 1003 | 1678 |
chr.17 | 6/4 | 3/7 | 1/1 | 2/6 | 7/2 | 8/3 | 5/8 | 4/5 |
HsC | -0.89 | -1.51 | -0.26 | -0.34 | 6.44 | 7.58 | 0.22 | -2.51 |
HOXC9 | 2361 | 2323 | 3108 | 1346 | 8687 | 6537 | 4150 | 3798 |
chr.12 | 7/6 | 8/7 | 5/5 | 6/8 | 2/1 | 1/2 | 3/3 | 9/4 |
HsD | -0.92 | -0.63 | -0.85 | -0.6 | -0.41 | -0.41 | -0.71 | 1.76 |
HOXD9 | 2799 | 1811 | 2660 | 871 | 3017 | 3013 | 1303 | 4326 |
chr.2 | 8/4 | 5/6 | 7/5 | 4/8 | 3/2 | 2/3 | 6/7 | 1/1 |