Table 5 Wall-clock runtime for the proteomics data sets P1 and P2 in minutes.
From: Critical assessment of alignment procedures for LC-MS proteomics and metabolomics measurements
Data set | msInspect | MZmine | OpenMS | SpecArray | XAlign | XCMS | |
|---|---|---|---|---|---|---|---|
| Â | Â | Â | Â | Â | Â | without retention time | with correction |
P1 | 1 | 0.67 | 1.6 | 1.85 | 1.15 | 0.53 | 0.90 |
P2 | 0.75 | 1.22 | 0.36 | 5.19 | 0.29 | 0.33 | 0.49 |
Total | 1.75 | 1.89 | 1.96 | 7.04 | 1.44 | 0.86 | 1.39 |