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Table 1 Main characteristics of the SNP databases currently accessed by SPSmart

From: SPSmart: adapting population based SNP genotype databases for fast and comprehensive web access

Database SNPs Populations Web Address
HapMap Phase II 4,098,495 4 http://hapmap.org/genotypes/
HapMap Phase III 1,614,792 11 http://hapmap.org/genotypes/
Perlegen 1,580,349 3 http://genome.perlegen.com/
Stanford HGDP 660,918 52 ftp://ftp.ceph.fr/hgdp_supp1/
Michigan HGDP 525,910 33 ftp://ftp.ceph.fr/hgdp_supp2/