Table 3 Comparison of block structures of simulated data and original data.
From: Generating samples for association studies based on HapMap data
Dataset | Original | Extension | Block | |||||
|---|---|---|---|---|---|---|---|---|
# blocks | avg len | # blocks | avg len | overlap | # blocks | avg len | overlap | |
ALS Chr1 500 SNPs | 93 | 3.67 | 91.95 | 3.61 | 91.98% | 92.91 | 3.54 | 94.34% |
ENr112.2p16.3 | 42 | 19.14 | 51.02 | 16.86 | 98.34% | 67.30 | 12.21 | 97.17% |
ENr131.2q37.1 | 54 | 16.85 | 54.95 | 17.02 | 96.88% | 79.59 | 11.21 | 95.26% |
ENr113.4q26 | 23 | 44.78 | 26.55 | 39.96 | 98.11% | 91.51 | 10.78 | 93.87% |
ENm010.7p15.2 | 28 | 15.36 | 27.47 | 16.05 | 96.98% | 31.60 | 13.68 | 96.99% |
ENm013.7q21.13 | 22 | 33.05 | 17.59 | 41.58 | 96.27% | 57.58 | 11.88 | 91.08% |
ENm014.7q31.33 | 23 | 37.70 | 19.15 | 45.33 | 96.79% | 70.3 | 11.69 | 92.04% |
ENr321.8q24.11 | 24 | 21.50 | 26.12 | 19.88 | 97.08% | 32.01 | 15.87 | 96.38% |
ENr232.9q34.11 | 24 | 17.29 | 31.08 | 13.85 | 96.85% | 36.02 | 11.56 | 96.94% |
ENr123.12q12 | 31 | 21.81 | 26.57 | 27.02 | 97.27% | 48.40 | 13.92 | 96.15% |
ENr213.18q12.1 | 19 | 29.74 | 22.32 | 26.40 | 97.68% | 36.83 | 15.41 | 96.71% |