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Figure 1 | BMC Bioinformatics

Figure 1

From: Volume-based solvation models out-perform area-based models in combined studies of wild-type and mutated protein-protein interfaces

Figure 1

ΔG models with Locked and Unlocked interfacial sidechains, Minimal-HighSA. Binding models are fit to wild-type ΔGEXP, and Minimal-HighSA implies no repacking for wild-type systems. (a) Model fit with ΔGSC-ROT calculated for Locked interfacial sidechains and ΔGROT-TRANS = 0 (R2 = 0.69). (b) Correlation between ΔGEXP and Δ(ASA-NP) (R2 = 0.55). (c) Poor correlation (R2 = 0.12) between ΔGSC-ROT calculated with Locked and Unlocked interfacial sidechains. (d) Model fit with ΔGSC-ROT calculated for Locked interfacial sidechains and ΔGROT-TRANS = 0 (R2 = 0.61). For plots with equivalent y and x quantities, the line y = x is shown.

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BMC Bioinformatics

ISSN: 1471-2105

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