From: Models of deletion for visualizing bacterial variation: an application to tuberculosis spoligotypes
Model name | No. of parameters | Parameter estimate | AIC _{ c } |
---|---|---|---|
Geometric^{a} | 1 | $\widehat{p}$ = 0.5935 | 1128.82 |
Negative binomial^{a} | 2 | $\widehat{r}$ = 1; $\widehat{p}$ = 0.5935 | 1130.82 |
Conditional Poisson^{a} | 1 | $\widehat{\lambda}$ = 3.3697 | 1597.9 |
Logarithmic series^{a} | 1 | $\widehat{\theta}$ = 0.7967 | 1044.49 |
Zeta^{a} | 1 | $\widehat{\rho}$ = 2.0696 | 1033.46 |
Zipf k ∈ [1, 43] | 1 | $\widehat{p}$ = 1.9962 | 1025.23^{b} |
Uniform (V) k ∈ [1, 10] | 1 | $\widehat{a}$ = 10 | 1770.39 |
Uniform (F) k ∈ [1, 43] | 1 | $\widehat{p}$ = 1/43 | 2351.77 |
Empirical-based k ∈ [1, 43] | 42 | ${\widehat{p}}_{k}$ | 1066.94 |