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Table 2 Switch Error Rates

From: Inference of haplotypic phase and missing genotypes in polyploid organisms and variable copy number genomic regions

 

diploid

triploid

tetraploid

method

I = 1

I = 10

I = 1

I = 10

I = 1

polyHap:

     

z = 8

0.078

0.068

0.127

0.114

0.175

z = 6

0.085

0.074

0.132

0.117

0.239

z = 4

0.098

0.082

0.147

0.127

0.263

z = 2

0.153

0.119

0.241

0.186

0.323

fastPhase:

     

z = 20

0.087

0.071

   

z = 10

0.098

0.076

   

z = 8

0.093

0.078

   
  1. I is the number of repetitions of the EM algorithm.
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BMC Bioinformatics

ISSN: 1471-2105

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