Figure 1

Accuracy of the submitted gene sets. Plots of the specificity against sensitivity of the submitted gene sets, at the base level (A), exon level (B), isoform level (C) and gene level (D). The submitted gene sets are coloured by nGASP category, with ab initio (category 1) gene sets in red, gene-finders that used multi-genome alignments (category 2) in black, gene-finders that used transcript/protein alignments (category 3) in blue, and combiners (category 4) in green. The gene sets are labelled as follows: AU: AUGUSTUS, MG: MGENE, CR: CRAIG, AG: Agene, EU: EUGENE, FPC: Fgenesh++C, FP: Fgenesh++, FG: Fgenesh, GE: GeneID, GM: GeneMark.hmm, GX: GENOMIX, GS: GESECA, GN: GLEAN, GL: GlimmerHMM, GR: Gramene, JW: JIGSAW, MK: MAKER (using SNAP), MG: MGENE, NS: N-SCAN, SG: SGP 2, SN: SNAP, EX: ExonHunter, EV: Evigan.