Figure 5From: Designing multiple degenerate primers via consecutive pairwise alignmentsComparison of PAMPS (open circles) and PT-MIPS (open triangles) in terms of compuatation time. Different numbers of sequences with length 50 nt are used to generate primers of length at least 15 nt and degeneracy at most 104. In the case of 100 sequences, the run time for PT-MIPS is 213s, while for PAMPS it is 63 ms which is 3380 times faster.Back to article page